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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
Posts
Future Blog Post
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Blog Post number 4
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This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
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Blog Post number 2
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Blog Post number 1
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portfolio
Portfolio item number 1
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publications
Assessing metastatic potential of breast cancer cells based on EGFR dynamics
Published in Scientific reports, 2019
Using single-particle tracking techniques, we developed a phenotyping asssay named Transmembrane Receptor Dynamics (TReD), studied the dynamics of epidermal growth factor receptor (EGFR) in seven breast epithelial cell lines.
Recommended citation: Liu, YL., Chou, CK., Kim, M. et al. Assessing metastatic potential of breast cancer cells based on EGFR dynamics. Sci Rep 9, 3395 (2019). https://doi.org/10.1038/s41598-018-37625-0 https://www.nature.com/articles/s41598-018-37625-0
Spatial EGFR dynamics and metastatic phenotypes modulated by upregulated EphB2 and Src pathways in advanced prostate cancer
Published in Cancers, 2019
Recommended citation: Liu Y-L, Horning AM, Lieberman B, Kim M, Lin C-K, Hung C-N, Chou C-W, Wang C-M, Lin C-L, Kirma NB, et al. Spatial EGFR Dynamics and Metastatic Phenotypes Modulated by Upregulated EphB2 and Src Pathways in Advanced Prostate Cancer. Cancers. 2019; 11(12):1910. https://doi.org/10.3390/cancers11121910 https://www.mdpi.com/2072-6694/11/12/1910
Three-dimensional two-color dual-particle tracking microscope for monitoring DNA conformational changes and nanoparticle landings on live cells
Published in ACS Nano, 2020
Here, we present a three-dimensional two-color dual-particle tracking (3D-2C-DPT) technique that can simultaneously localize two spectrally distinct targets in three dimensions with a time resolution down to 5 ms.
Recommended citation: Liu, Y.-L., Perillo, E. P., Ang, P., Kim, M., Nguyen, D. T., Blocher, K., Chen, Y.-A., Liu, C., Hassan, A. M., Vu, H. T., Chen, Y.-I., Dunn, A. K., & Yeh, H.-C. (2020). Three-Dimensional Two-Color Dual-Particle Tracking Microscope for Monitoring DNA Conformational Changes and Nanoparticle Landings on Live Cells. ACS Nano 14(7) 7927–7939. https://doi.org/10.1021/acsnano.9b08045 https://pubs.acs.org/doi/abs/10.1021/acsnano.9b08045
Transmembrane Receptor Dynamics as Biophysical Markers for Assessing Cancer Cells
Published in Handbook of Single-Cell Technologies, 2021
This book chapter is about Transmembrane Receptor Dynamics
Recommended citation: Kim, M., Liu, YL. (2022). Transmembrane Receptor Dynamics as Biophysical Markers for Assessing Cancer Cells. In: Santra, T.S., Tseng, FG. (eds) Handbook of Single-Cell Technologies. Springer, Singapore. https://doi.org/10.1007/978-981-10-8953-4_38 https://link.springer.com/content/pdf/10.1007/978-981-10-8953-4_38.pdf
Deep learning-based classification of breast cancer cells using transmembrane receptor dynamics
Published in Bioinformatics, 2022
Here we employ deep learning to classify breast cancer cell types based on the trajectories of epidermal growth factor receptor (EGFR)
Recommended citation: Mirae Kim, Soonwoo Hong, Thomas E Yankeelov, Hsin-Chih Yeh, Yen-Liang Liu, Deep learning-based classification of breast cancer cells using transmembrane receptor dynamics, Bioinformatics, Volume 38, Issue 1, January 2022, Pages 243–249, https://doi.org/10.1093/bioinformatics/btab581 https://academic.oup.com/bioinformatics/article/38/1/243/6352489
talks
Talk 1 on Relevant Topic in Your Field
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Conference Proceeding talk 3 on Relevant Topic in Your Field
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This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
COMP572: Bioinformatics: Networks
Undergraduate and Graduate course, Department of Computer Science, Rice University, 2022
Senior undergraduate and gradaute course about to network-based approaches using biological data.
COMP429: Intro to Computer Networks
Undergraduate and Graduate course, Department of Computer Science, Rice University, 2023
Undergraduate course about basics of computer networkx along with analyzing concepts related to network traffic.